BIOlabSem 3
BIOINFORMATICS LAB
BIO 3141
Syllabus
- 01sequence retrieval
- 02alignment and analysis (similarity search including pairwise and multiple alignment)
- 03basics of PERL programming
- 04primer design
- 05molecular phylogeny with algorithms (NJ, UPGMA, FM & ME)
- 06secondary structure prediction
- 07structure visualization and analysis
- 08structure alignments to explore homology and distant relationships
- 09protein homology-based modeling
- 10structure validations
References
- David W Mount. 2004. BIOINFORMATICS: Sequence and Genome Analysis. Cold Spring Harbor Laboratory Press
- Andreas D Baxevanis, Gary D. Bader, David S. Wishart. 4th Edn, 2020. BIOINFORMATICS. Wiley Interscience
Credits Structure
0Lecture
0Tutorial
3Practical
1Total